eCommerce Accountants

Are you using an eCommerce platform to power your business? eAccounts are eCommerce Accountants.

Excellent 5.0 out of 5.0
eAccounts|eCommerce Accountants

Ecommerce Accountants For Your Online Business

eAccounts|eCommerce Accountants

Are you an eCommerce seller in the UK seeking professional accounting support?

At eAccounts, we specialise in eCommerce accounting for businesses on Amazon, eBay, Shopify, Etsy, TikTok, Walmart, and more. As a Xero Platinum Partner, we help you stay on top of your finances, manage taxes, and achieve long-term growth.

Get unlimited support from our chartered accountants, so your eCommerce business will be in expert hands.

The problem with general accountants

A general accountant treats your Amazon payout as revenue, missing FBA fees, advertising costs and returns already deducted. You could pay tax on money you never received.

Key Features

🏪
Marketplace settlement reconciliation
Every settlement matched line by line — not just recording the deposit
🧾
Platform fee categorisation
Fulfilment, returns, refunds and advertising all correctly allocated
🌍
Multi-currency VAT management
UK, EU and international VAT handled across every platform
📦
Inventory & COGS tracking
Real profit margin visibility — not just what hit your bank
💳
Payment gateway reconciliation
Stripe, PayPal and Klarna deposits matched against platform sales
💻
Making Tax Digital compliance
MTD-ready from day one via Xero — no extra effort from you

Why Choose eAccounts as your eCommerce Accountants

eCommerce businesses face unique challenges in managing finances, from inventory tracking to understanding VAT requirements.

Our experience in eCommerce accounting means we deliver solutions that meet your needs, helping you make informed decisions and scale your operations. eAccounts offers:

    • Xero integration for immediate financial tracking
    • Link My Books for clear sales reports
    • Customised VAT and tax advice
    • A dedicated eCommerce accountant team
eAccounts|eCommerce Accountants
Grace smiling with her arms crossed

Accounting Services for eCommerce Businesses

Our e-commerce services cover all areas to ensure your business remains compliant and profitable:  

  • Bookkeeping: Efficiently track and organise your sales and expenses.
  • Tax Planning: Maximise savings with tailored tax strategies.
  • VAT Returns: Stay compliant with UK VAT regulations.
  • Year-End Accounts: Accurate and timely annual accounts.

Each service is crafted to suit eCommerce sellers, allowing you to focus on growing your business.

Essential Tools of eCommerce Accountants

As a Xero Platinum Partner, we make it easy to track your financial data in real time. Xero offers necessary features like invoicing, expense tracking, and reporting, all accessible in one place. 

Paired with Link My Books, it lets our eCommerce accountants reconcile sales from multiple platforms and make sure your books add up.

eAccounts|eCommerce Accountants
All-inclusive · From £29 + VAT per month

Everything included. Nothing extra.

👤
Dedicated accountant
Your own named accountant — no call centres, no handoffs
✓ Included
☁️
Xero software
Full subscription — real-time reporting, bank feeds, invoicing
✓ Included
🔌
Link My Books
Platform-to-Xero sync — zero manual entry, always accurate
✓ Included
📄
VAT returns
Filed with HMRC — UK, OSS and IOSS all covered
✓ Included
📊
Year-end accounts
Corp tax or self-assessment — fully handled end to end
✓ Included
🎧
Unlimited support
No per-question charges — contact your accountant any time
✓ Included

Specialised eCommerce Accountants for Major eCommerce Platforms

Whether you’re selling on Amazon, eBay, Shopify, Etsy, TikTok, Walmart, or Vinted, eAccounts provides tailored accounting solutions to meet your specific needs. Here’s how we support businesses on these major platforms:

eAccounts|eCommerce Accountants

As one of the largest online marketplaces, Amazon requires precise accounting to manage inventory, sales, and fees. Our eCommerce accountants specialise in syncing Amazon data with cloud accounting software to track finances and ensure correct reporting.

eAccounts|eCommerce Accountants

eBay sellers need to manage various fees and transactions. We offer comprehensive e-commerce accounting services that handle eBay’s complex fee structures while providing a clear understanding of your financial performance.

eAccounts|eCommerce Accountants

Shopify is a leading platform for building online stores. Our experts use cloud e-commerce accounting software like Xero to combine with Shopify, making sure that all sales, expenses, and inventory data are precisely recorded and reviewed. 

eAccounts|eCommerce Accountants

Etsy sellers benefit from our specialised accounting and bookkeeping services tailored to the platform’s unique needs. We manage Etsy’s fees and sales data, giving clear financial reports and helping you grow your business.

eAccounts|eCommerce Accountants

With TikTok’s growing role in social commerce, we integrate TikTok sales data into your financial system to track performance and manage influencer payments effectively.

eAccounts|eCommerce Accountants

Selling on Walmart’s marketplace requires full financial oversight. Our eCommerce accountants handle Walmart’s sales and fee structures, making sure accurate and timely financial reporting.

How eCommerce Accounting Can Help Your Online Store

VAT Compliance for eCommerce Sellers

Understanding VAT regulations is crucial for eCommerce businesses selling in the UK.

We offer expert advice on VAT registration, returns, and compliance, helping you avoid costly mistakes. So, whether you exceed the VAT threshold of £90,000 or sell internationally, our team ensures your VAT responsibilities are met.

eAccounts|eCommerce Accountants
eAccounts|eCommerce Accountants

Tax Planning and Optimisation

Effective tax planning is vital for maximising your profits. Our eCommerce accountants analyse your business structure and develop strategies to reduce tax liability.

We handle everything from self-assessment to corporation tax for limited companies, helping you keep more of your money.

Bookkeeping Tailored for eCommerce Businesses

Proper bookkeeping is the foundation of successful eCommerce businesses. At eAccounts, we handle your daily transactions, categorise expenses, and prepare statements to keep you financially organised.

With Xero’s direct integration, we ensure your books are always precise and up-to-date.

Annual Accounts and Financial Statements

Getting year-end accounts ready can take a lot of time, especially if you sell on more than one platform.

Our e-commerce accounting services take care of everything, from financial statements to profit and loss reports. By handling your annual accounts, we give you valuable insights into your business performance, helping you make data-driven decisions. 

Payroll Services for eCommerce Business Owners

If you employ staff, our payroll services simplify wage calculations, tax deductions, and reporting. We ensure compliance with PAYE regulations, offering secure, accurate payroll processing that saves you time.

So, let us handle your payroll so you can focus on what matters -growing your eCommerce business.

Kylie smiling
%
VAT for eCommerce sellers
Getting it wrong means penalties, backdated bills and HMRC investigations
UK VAT registration

Register once your taxable turnover for the last 12 months goes over £90,000, or you expect it to in the next 30 days. For multi-platform sellers this can happen faster than expected. We monitor and handle registration when needed.

EU VAT — OSS & IOSS

Selling to EU customers? You may need the One Stop Shop scheme. For goods in consignments worth €150 or less imported into the EU, IOSS applies. We handle registrations, filings and compliance.

Making Tax Digital

All VAT-registered businesses must use MTD-compatible software. Xero is fully compliant — your eAccounts setup meets all MTD obligations from day one.

Marketplace VAT rules

If your business is based in the UK, you account for the VAT on your marketplace sales yourself. Marketplaces such as Amazon, eBay and Etsy only charge and account for the VAT when goods are sold by overseas sellers from stock in the UK, or imported in consignments worth £135 or less. We make sure your books treat each type of sale correctly.

Kris holding an iPad while smiling.

Self-Assessment and Corporation Tax Services

Our team manages your self-assessment and corporation tax obligations, making sure your taxes are submitted precisely and on time.

We also reduce your tax bill by making sure you claim every allowable expense and relief that applies to an eCommerce business.

Inventory Management and Cost of Goods Sold (COGS) Calculations

For eCommerce businesses, precisely tracking inventory and COGS is key.

We help you manage your stock and work out COGS, so your profits and expenses line up. This lets you see the true financial health of your business, making it easier to plan for growth.

Up and running in days, not weeks

Most clients are fully set up within a few days.

1
Get your quote2 minutes

Use our online quote tool for a personalised price — tailored to your platforms and business structure.

2
We connect your platformsSame day

Our onboarding team connects your platforms to Xero via Link My Books, sets up bank feeds and configures VAT from day one.

3
Meet your accountantWithin 48hrs

Your dedicated eCommerce accountant reviews your setup and becomes your ongoing point of contact.

4
Ongoing compliance & supportForever

Bookkeeping, VAT returns, payroll, year-end accounts and tax filings — all handled. Contact your accountant any time.

Why 1,000+ UK online sellers choose eAccounts

Specialist eCommerce accountants, with Xero and Link My Books set up for every client.

1,000+
UK businesses
Online sellers across every major platform
5.0 ★
Google rating
77 Google reviews
From £29 + VAT per month
Fixed fee
Fixed fee — no surprises, ever
∞
Unlimited support
No per-question fees — ever

What UK online sellers say about us

Real Google reviews from our clients, shown word for word. Names removed for client privacy.

★★★★★

Ecommerce bookkeeping, VAT and advice, with a named team by email, call or video.

“I would highly recommend choosing e-accounts who specialise in e-commerce. They have a solid understanding of the industry and stay on top of its changes. I usually comminicate with Daniel, Kris and Joseph. They are very efficient with quick responses and give advice and support for my business via email, call or video meeting.”
Amazon & Shopify sellerGoogle review · January 2025
★★★★★

Incorporation, VAT registration, VAT returns and Xero bookkeeping for a multi-channel seller.

“Thoroughly recommend eAccounts, anyone reading this I wouldn't hesitate to reach out and chat to one of the guys. We run a multi channel e-Commerce selling business, up till now I've been doing my best to muddle through. Kris and Dan have guided me through incorporating, registering for VAT, VAT returns, learning book-keeping on Xero, fixing my inevitable mistakes. Dan has been super patient with me given a whole bunch of naive questions combined with me juggling two jobs and taking forever to do tasks, I'm almost certainly not the easiest client on the books, but he's kept me safe of deadlines and true to the tax laws and informed throughout can't really ask for much more from an accountant.”
Amazon sellerGoogle review · December 2024
★★★★★

Ecommerce accounting and tax for a Shopify store.

“Fantastic service combined with an excellent knowledge of accounting and how it impacts e-commerce. Would strongly recommend.”
Shopify sellerGoogle review · November 2024
Read all 77 reviews on Google →
Chloe smiling looking at an iPad

Contact Us for E-Commerce Accounting Today

We are eCommerce Accountants committed to providing eCommerce businesses with the highest quality accounting services. 

Get an instant quote below or Contact us today for a free consultation and discover how our expertise can help your eCommerce business thrive.

Explore our platform pages

Detailed guides and services for every major eCommerce marketplace

FAQ

Frequently Asked Questions

What does an ecommerce accountant do?

An eCommerce accountant manages bookkeeping, VAT returns, corporation tax or self-assessment, year-end accounts and payroll for online sellers. They reconcile marketplace settlements, correctly categorise platform fees and integrate your selling platforms with Xero. Unlike a general accountant, they understand the specific complexities of Amazon, Shopify, eBay, Etsy, TikTok Shop and other platforms.

eAccounts packages start from £29 + VAT per month. Your fixed fee covers your dedicated accountant, Xero subscription, Link My Books integration, VAT returns, bookkeeping and unlimited support. No hourly charges, no hidden fees.

For eCommerce sellers, particularly those on Amazon, Shopify or multiple platforms, a specialist is strongly recommended. General accountants frequently make errors with settlements, fee deductions, VAT treatment and COGS calculations. These errors can mean you overpay tax or face HMRC compliance issues. A specialist gets it right from day one.

Yes. We work with sellers across Amazon FBA and FBM, Shopify, eBay, Etsy, TikTok Shop, Vinted, Whatnot, Temu, Walmart, WooCommerce and more. We consolidate all your channels into one accurate set of accounts.

You must register for VAT once your taxable turnover exceeds £90,000 in any 12-month period. For multi-platform sellers this can happen faster than expected when sales across all channels are combined. If your business is based outside the UK, there is no threshold: you must register as soon as you supply goods in the UK. eAccounts monitors your turnover and advises you in advance.

Link My Books connects directly to your marketplace accounts — Amazon, Shopify, eBay, Etsy and others — and automatically imports your settlement data into Xero. It correctly splits fees, VAT, sales and refunds, eliminating manual entry. We set this up and manage it for you as part of your package.

MTD requires all VAT-registered businesses to keep digital records and file returns using compatible software. Xero is fully MTD-compliant. Your eAccounts setup meets all MTD obligations from day one without any extra effort on your part.

Yes. We handle EU VAT registration, OSS and IOSS for EU sales, and multi-currency bookkeeping. If you sell internationally we ensure you remain compliant across all relevant territories.

We handle the entire switch. Once you sign up we contact your previous accountant, request the professional handover, obtain all relevant records and onboard you onto our systems. Most clients are fully set up within a few days with no disruption to compliance deadlines.

Get a personalised quote in under 2 minutes at our quote page. Tailored to your platforms, business structure and the services you need.